While large livestock operations are more readily managed, the risks posed by wildlife are more difficult to control. Birds, rodents, deer, and other wild animals are known carriers of zoonotic pathogens and can contaminate crops through faecal droppings, especially if they feed or roost in fields (8). For instance, wild deer populations in Scotland have tested positive for E. coli O157 and Cryptosporidium spp., though the prevalence is generally lower than in livestock (9-11). Even low prevalence may be significant due to the low infectious dose of E. coli O157:H7. Faecal contamination from birds (especially gulls, pigeons, and corvids) is also a concern, particularly near open reservoirs or fields where birds congregate in large numbers (8).
The role of rodents, such as rats and field mice, should not be underestimated. These animals can deposit faeces directly onto crops or contaminate stored produce. Studies from UK farm environments have found Salmonella spp. in wild rodents at low but detectable levels (8, 12).
Compared to livestock, much less is known about the prevalence and levels of zoonotic pathogens in wildlife manure. However, a detailed review by Simpson provides valuable insights (8). Below is a non-complete summary (Table 2) of British wildlife species known to harbour zoonotic pathogens. This table is not exhaustive but does highlight some less obvious species that growers may not typically associate with contamination risks.
There have been documented cases where the same zoonotic pathogen was found in crops, irrigation water, and wildlife - although the direction of transmission (i.e. whether the wildlife contaminated the crop or vice versa) is often unclear. Table 2 aims to alert producers to possible wildlife vectors that may not have been fully considered.
Table 2: A selection of the zoonotic pathogens that can colonise animals in the UK
Animal | Zoonotic Agent | Reference |
---|
Deer | Salmonella | Fletcher et al., 1997 (9) |
Mycobacterium brevis |
E. coli O157:H7 | Laidler et al., 2013 (10), Garcia-Sánchez et al., 2007 (11) |
Reindeer | Bacillus anthracis | Carlson et al., 2019 (13) |
Bats | Lyssavirus (rabies) | Johnson et al., 2003 (14) |
Earthworms | E. coli O157 | Williams et al., 2006 (15) NB: study used artificially contaminated manure as no naturally infected livestock wastes were available |
Crows | Campylobacter | Simpson, 2008 (8) |
Ticks | Bartonella | Guptill, 2010 (16) |
Unknown water-borne organism | Hepatitis A virus | Philipp et al., 1989 (17) |
Pheasant | Newcastle virus | Aldous et al., 2007 (18) |
Voles | Cowpox virus | Simpson, 2008 (8) |
Rats | Leptospira | Cutler et al., 2010 (12) |
Weasels | Mycobacterium avium paratuberculosis | Stevenson et al., 2009 (19) |
Geese | Cryptosporidium parvum | Wells et al., 2009 (20) |
Badgers | Mycobacterium bovis | Chambers, 2009 (21) |
Hedgehogs | Listeria monocytogenes | Hydeskov et al., 2019 (22) |
Gulls | Salmonella | Simpson, 2008 (8) |
Otters | Brucella |
Rabbits | E. coli O157 |
| Salmonella | Hutchinson et al., 2004 (3) |
Beavers | Giardia intestinalis | Horton et al., 20192 (3) |